EnhancerDB
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  3. rs541635989[chr6:47208608]
Enhancers that have rs541635989[chr6:47208608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47202205 47219001 enh9147
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541635989[chr6:47208608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47208605 47208620 FOXP1 JASPAR yes 102014006
chr6 47208607 47208613 TBP TRANSFAC yes 102014007
chr6 47208607 47208618 FOXC1 JASPAR yes 102014008
chr6 47208607 47208619 FOXC2 JASPAR yes 102014009
chr6 47208608 47208619 FOXP2 JASPAR yes 102014010
Genes associated with rs541635989[chr6:47208608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More