EnhancerDB
  1. Home
  2. SNP
  3. rs541644614[chr1:229362558]
Enhancers that have rs541644614[chr1:229362558]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541644614[chr1:229362558]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229362473 229362909 ZNF274 GTRD no Cervix (HeLa-S3) 21390831
chr1 229362556 229362565 HIC2 JASPAR yes 35977079
chr1 229362557 229362570 TFAP2A JASPAR yes 35977080
chr1 229362558 229362569 USF2 JASPAR yes 35977081
Genes associated with rs541644614[chr1:229362558], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More