EnhancerDB
  1. Home
  2. SNP
  3. rs541672649[chr16:89504605]
Enhancers that have rs541672649[chr16:89504605]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541672649[chr16:89504605]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89504586 89504605 REST JASPAR yes 12344197
chr16 89504595 89504607 TAL1 JASPAR yes 12344198
chr16 89504596 89504609 ZBTB18 JASPAR yes 12344199
chr16 89504597 89504607 MSC JASPAR yes 12344200
chr16 89504597 89504607 MYF6 JASPAR yes 12344201
chr16 89504597 89504607 TFAP4 JASPAR yes 12344202
chr16 89504597 89504609 TAL1 JASPAR yes 12344203
chr16 89504604 89504618 GATA2 JASPAR yes 12344204
Genes associated with rs541672649[chr16:89504605], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More