EnhancerDB
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  3. rs541689033[chr12:109119601]
Enhancers that have rs541689033[chr12:109119601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541689033[chr12:109119601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109119587 109119602 FOXA1 JASPAR yes 123617164
chr12 109119588 109119603 FOXP1 JASPAR yes 123617166
chr12 109119589 109119601 FOXC2 JASPAR yes 123617167
chr12 109119589 109119603 ONECUT2 JASPAR yes 123617168
chr12 109119589 109119603 ONECUT3 JASPAR yes 123617169
chr12 109119590 109119601 FOXB1 JASPAR yes 123617170
chr12 109119590 109119601 FOXC1 JASPAR yes 123617171
Genes associated with rs541689033[chr12:109119601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More