EnhancerDB
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  3. rs541694259[chr16:85424946]
Enhancers that have rs541694259[chr16:85424946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs541694259[chr16:85424946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724644
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724645
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214247
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214248
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724657
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724658
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214251
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214252
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724659
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724660
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214253
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214254
chr16 85420327 85425759 TCF7L2 GTRD no Colon (HCT116) 21724731
chr16 85420327 85425759 TCF7L2 GTRD no Colon (HCT116) 108214266
chr16 85421249 85425869 TCF7L2 GTRD no Colon (HCT116) 21724792
chr16 85421249 85425869 TCF7L2 GTRD no Colon (HCT116) 108214267
chr16 85421840 85425210 ZNF143 GTRD no Epithelial (MCF-7) 21724806
chr16 85421840 85425210 ZNF143 GTRD no Epithelial (MCF-7) 108214268
chr16 85421856 85424980 ZNF143 GTRD no Epithelial (MCF-7) 21724808
chr16 85421856 85424980 ZNF143 GTRD no Epithelial (MCF-7) 108214270
chr16 85423810 85425719 ZNF274 GTRD no Bone Marrow (K562) 21724870
chr16 85423810 85425719 ZNF274 GTRD no Bone Marrow (K562) 108214271
chr16 85424241 85424965 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724876
chr16 85424241 85424965 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214277
chr16 85424463 85425406 TCF7L2 GTRD no Colon (HCT116) 21724911
chr16 85424463 85425406 TCF7L2 GTRD no Colon (HCT116) 108214329
chr16 85424659 85425188 TCF7L2 GTRD no Colon (HCT116) 21724912
chr16 85424659 85425188 TCF7L2 GTRD no Colon (HCT116) 108214330
chr16 85424693 85424957 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724913
chr16 85424693 85424957 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214331
chr16 85424887 85425718 TCF7L2 GTRD no Colon (HCT116) 21724914
chr16 85424926 85425781 TCF7L2 GTRD no Colon (HCT116) 21724915
Genes associated with rs541694259[chr16:85424946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More