EnhancerDB
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  3. rs541749936[chr17:55547316]
Enhancers that have rs541749936[chr17:55547316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541749936[chr17:55547316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55547306 55547321 JUND JASPAR yes 54958298
chr17 55547307 55547320 JUN JASPAR yes 54958299
chr17 55547308 55547321 ATF4 JASPAR yes 54958300
chr17 55547313 55547329 ZNF143 JASPAR yes 54958301
Genes associated with rs541749936[chr17:55547316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More