EnhancerDB
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  3. rs541784784[chr17:57876023]
Enhancers that have rs541784784[chr17:57876023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57857985 57884695 enh4506
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541784784[chr17:57876023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57876018 57876023 SP1 TRANSFAC yes 55083972
chr17 57876023 57876034 USF1 JASPAR yes 55083973
chr17 57876023 57876034 USF2 JASPAR yes 55083974
Genes associated with rs541784784[chr17:57876023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More