EnhancerDB
  1. Home
  2. SNP
  3. rs541789458[chr11:20053711]
Enhancers that have rs541789458[chr11:20053711]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 20020085 20069135 enh13838
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Lung (PC-9) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs541789458[chr11:20053711]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 20053219 20053715 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21473821
chr11 20053219 20053715 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107961546
chr11 20053227 20053797 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21473822
chr11 20053227 20053797 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107961547
chr11 20053227 20053797 ZNF217 UCSC Txn Factor no Conserved 107961548
chr11 20053243 20053753 GATA3 UCSC Txn Factor no Conserved 107961549
chr11 20053244 20054268 P63 GTRD no Skin (Keratinocyte) 21473823
chr11 20053244 20054268 P63 GTRD no Skin (Keratinocyte) 107961550
chr11 20053283 20053753 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21473824
chr11 20053283 20053753 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107961551
chr11 20053286 20054291 P63 GTRD no Skin (Keratinocyte) 21473825
chr11 20053286 20054291 P63 GTRD no Skin (Keratinocyte) 107961552
chr11 20053303 20054216 P63 GTRD no Skin (Keratinocyte) 21473826
chr11 20053303 20054216 P63 GTRD no Skin (Keratinocyte) 107961553
chr11 20053378 20054294 P63 GTRD no Skin (Keratinocyte) 21473827
chr11 20053378 20054294 P63 GTRD no Skin (Keratinocyte) 107961555
chr11 20053699 20053714 RUNX2 JASPAR yes 37828765
Genes associated with rs541789458[chr11:20053711], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More