EnhancerDB
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  3. rs541796959[chr3:187999597]
Enhancers that have rs541796959[chr3:187999597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541796959[chr3:187999597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 187999587 187999600 POU3F3 JASPAR yes 8466390
chr3 187999587 187999602 FOXA1 JASPAR yes 8466391
chr3 187999588 187999600 FOXI1 JASPAR yes 8466392
chr3 187999588 187999600 POU3F1 JASPAR yes 8466393
chr3 187999588 187999600 POU3F2 JASPAR yes 8466394
chr3 187999588 187999603 FOXP1 JASPAR yes 8466395
chr3 187999589 187999597 FOXL1 JASPAR yes 8466396
chr3 187999589 187999600 FOXP2 JASPAR yes 8466397
chr3 187999589 187999601 FOXC2 JASPAR yes 8466398
chr3 187999589 187999603 FOXF2 JASPAR yes 8466399
chr3 187999590 187999598 FOXG1 JASPAR yes 8466400
chr3 187999590 187999601 FOXB1 JASPAR yes 8466401
chr3 187999590 187999601 FOXC1 JASPAR yes 8466402
chr3 187999591 187999602 FOXA1 JASPAR yes 8466403
chr3 187999593 187999605 MEF2D JASPAR yes 8466404
chr3 187999595 187999599 YY1 TRANSFAC yes 8466405
Genes associated with rs541796959[chr3:187999597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More