EnhancerDB
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  3. rs541849809[chr1:173398863]
Enhancers that have rs541849809[chr1:173398863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs541849809[chr1:173398863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173398545 173399570 POLR2A UCSC Txn Factor no Conserved 107846733
chr1 173398553 173399073 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846734
chr1 173398564 173399004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351425
chr1 173398564 173399004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846735
chr1 173398576 173398946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846736
chr1 173398576 173399012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846737
chr1 173398583 173398953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351426
chr1 173398583 173398953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846738
chr1 173398600 173398964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351427
chr1 173398600 173398964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846739
chr1 173398602 173398926 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846740
chr1 173398607 173398917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351428
chr1 173398607 173398917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846741
chr1 173398611 173398921 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21351429
chr1 173398611 173398921 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107846742
chr1 173398614 173398944 MAX UCSC Txn Factor no Conserved 107846743
chr1 173398614 173398944 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846744
chr1 173398621 173398919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351430
chr1 173398621 173398919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846745
chr1 173398621 173398981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846746
chr1 173398621 173399339 CTCF UCSC Txn Factor no Conserved 107846747
chr1 173398642 173399002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351431
chr1 173398642 173399002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846748
chr1 173398646 173398906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351432
chr1 173398655 173398945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351433
chr1 173398655 173398945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846749
chr1 173398658 173398922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351434
chr1 173398658 173398922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846750
chr1 173398659 173398929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21351435
chr1 173398659 173398929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846751
chr1 173398660 173398950 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846752
chr1 173398661 173398951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846753
chr1 173398667 173398937 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351436
chr1 173398667 173398937 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846754
chr1 173398679 173398923 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846755
chr1 173398692 173398962 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846756
chr1 173398693 173398863 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351437
chr1 173398693 173398923 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21351438
chr1 173398693 173398923 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846757
chr1 173398694 173398874 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21351439
chr1 173398695 173398919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21351440
chr1 173398695 173398919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846758
chr1 173398706 173398882 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351441
chr1 173398714 173399064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351442
chr1 173398714 173399064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846759
chr1 173398722 173398892 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351443
chr1 173398738 173399382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351445
chr1 173398738 173399382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846760
chr1 173398748 173399152 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351446
chr1 173398748 173399152 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846761
chr1 173398776 173399172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351447
chr1 173398776 173399172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846762
chr1 173398778 173399428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351448
chr1 173398778 173399428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846763
chr1 173398804 173399148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351449
chr1 173398804 173399148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846764
chr1 173398806 173398888 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351450
chr1 173398807 173399207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846765
chr1 173398854 173398872 IRF2 JASPAR yes 33199446
chr1 173398859 173398874 IRF9 JASPAR yes 33199447
Genes associated with rs541849809[chr1:173398863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More