EnhancerDB
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  3. rs541852978[chr2:75066788]
Enhancers that have rs541852978[chr2:75066788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75065325 75080614 enh5655
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541852978[chr2:75066788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75066780 75066801 IRF1 JASPAR yes 75107988
chr2 75066785 75066800 FOXP1 JASPAR yes 75107989
chr2 75066786 75066801 FOXP1 JASPAR yes 75107990
chr2 75066787 75066802 FOXP1 JASPAR yes 75107991
chr2 75066788 75066803 FOXP1 JASPAR yes 75107992
Genes associated with rs541852978[chr2:75066788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More