EnhancerDB
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  3. rs541860039[chr12:92524793]
Enhancers that have rs541860039[chr12:92524793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92524185 92535575 enh2501
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs541860039[chr12:92524793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92524781 92524802 IRF1 JASPAR yes 122741015
chr12 92524784 92524798 IRF7 JASPAR yes 122741016
chr12 92524786 92524798 IRF1 JASPAR yes 122741017
chr12 92524787 92524802 FOXP1 JASPAR yes 122741018
chr12 92524787 92524808 IRF1 JASPAR yes 122741019
chr12 92524790 92524805 FOXP1 JASPAR yes 122741020
chr12 92524791 92524806 FOXP1 JASPAR yes 122741021
chr12 92524791 92524812 IRF1 JASPAR yes 122741022
chr12 92524792 92524807 FOXP1 JASPAR yes 122741023
Genes associated with rs541860039[chr12:92524793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More