EnhancerDB
  1. Home
  2. SNP
  3. rs541873571[chr1:23450004]
Enhancers that have rs541873571[chr1:23450004]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541873571[chr1:23450004]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23449985 23450006 IRF1 JASPAR yes 27415471
chr1 23449986 23450007 IRF1 JASPAR yes 27415473
chr1 23449988 23450009 IRF1 JASPAR yes 27415476
chr1 23449989 23450004 FOXP1 JASPAR yes 27415477
Genes associated with rs541873571[chr1:23450004], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More