EnhancerDB
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  3. rs541891339[chr1:27748957]
Enhancers that have rs541891339[chr1:27748957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541891339[chr1:27748957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27748952 27748967 MEF2C JASPAR yes 27691936
chr1 27748953 27748968 MEF2A JASPAR yes 27691937
chr1 27748954 27748966 MEF2A JASPAR yes 27691938
chr1 27748954 27748966 MEF2B JASPAR yes 27691939
chr1 27748954 27748966 MEF2D JASPAR yes 27691940
Genes associated with rs541891339[chr1:27748957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More