EnhancerDB
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  3. rs541909799[chr6:16391228]
Enhancers that have rs541909799[chr6:16391228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16389708 16416819 enh8977
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs541909799[chr6:16391228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16391224 16391239 MEF2C JASPAR yes 100295654
chr6 16391225 16391240 MEF2A JASPAR yes 100295655
chr6 16391226 16391238 MEF2A JASPAR yes 100295656
chr6 16391226 16391238 MEF2B JASPAR yes 100295657
chr6 16391226 16391238 MEF2D JASPAR yes 100295658
chr6 16391227 16391237 MEF2A JASPAR yes 100295659
Genes associated with rs541909799[chr6:16391228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More