EnhancerDB
  1. Home
  2. SNP
  3. rs541928010[chr1:229366131]
Enhancers that have rs541928010[chr1:229366131]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541928010[chr1:229366131]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229365654 229366137 ZNF143 GTRD no Epithelial (MCF-7) 21390855
chr1 229365654 229366137 ZNF143 GTRD no Epithelial (MCF-7) 107878010
chr1 229366033 229366487 ESR1 UCSC Txn Factor no Conserved 107878011
chr1 229366126 229366137 E2F4 JASPAR yes 35977640
chr1 229366127 229366132 SP1 TRANSFAC yes 35977641
chr1 229366127 229366133 SP1 TRANSFAC yes 35977642
chr1 229366131 229366707 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878012
Genes associated with rs541928010[chr1:229366131], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More