EnhancerDB
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  3. rs541990107[chr11:12809686]
Enhancers that have rs541990107[chr11:12809686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541990107[chr11:12809686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12809672 12809687 MEF2A JASPAR yes 37477452
chr11 12809673 12809688 MEF2C JASPAR yes 37477453
chr11 12809678 12809699 IRF1 JASPAR yes 37477454
chr11 12809680 12809701 IRF1 JASPAR yes 37477455
chr11 12809681 12809696 FOXP1 JASPAR yes 37477456
chr11 12809681 12809702 IRF1 JASPAR yes 37477457
chr11 12809683 12809698 FOXP1 JASPAR yes 37477458
chr11 12809685 12809700 FOXP1 JASPAR yes 37477459
chr11 12809686 12809701 FOXP1 JASPAR yes 37477460
Genes associated with rs541990107[chr11:12809686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More