EnhancerDB
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  3. rs542027761[chr1:171396427]
Enhancers that have rs542027761[chr1:171396427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs542027761[chr1:171396427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171396424 171396439 SOX21 JASPAR yes 33079398
chr1 171396424 171396445 REST JASPAR yes 33079399
chr1 171396425 171396444 REST JASPAR yes 33079400
Genes associated with rs542027761[chr1:171396427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More