EnhancerDB
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  3. rs542034395[chr1:10130519]
Enhancers that have rs542034395[chr1:10130519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542034395[chr1:10130519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10130500 10130521 IRF1 JASPAR yes 26699868
chr1 10130502 10130523 IRF1 JASPAR yes 26699871
chr1 10130503 10130524 IRF1 JASPAR yes 26699873
chr1 10130504 10130519 FOXP1 JASPAR yes 26699874
chr1 10130507 10130522 STAT2 JASPAR yes 26699875
chr1 10130519 10130523 YY1 TRANSFAC yes 26699876
Genes associated with rs542034395[chr1:10130519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More