EnhancerDB
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  3. rs542109088[chr1:182057326]
Enhancers that have rs542109088[chr1:182057326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs542109088[chr1:182057326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182056145 182057480 TCF7L2 GTRD no Colon (HCT116) 107849828
chr1 182056195 182057406 ZNF274 GTRD no Blood (GM12878) 107849829
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 21356906
chr1 182056495 182057532 ZNF274 GTRD no Bone Marrow (K562) 107849835
chr1 182057024 182057540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21356914
chr1 182057024 182057554 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21356915
chr1 182057034 182057530 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21356916
chr1 182057321 182057335 MTF1 JASPAR yes 33588710
chr1 182057322 182057327 SP1 TRANSFAC yes 33588711
Genes associated with rs542109088[chr1:182057326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More