EnhancerDB
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  3. rs542120667[chr5:159583056]
Enhancers that have rs542120667[chr5:159583056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542120667[chr5:159583056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159583041 159583056 FOXP1 JASPAR yes 67343900
chr5 159583042 159583057 FOXP1 JASPAR yes 67343901
chr5 159583043 159583058 FOXP1 JASPAR yes 67343902
chr5 159583043 159583064 IRF1 JASPAR yes 67343903
chr5 159583044 159583059 FOXP1 JASPAR yes 67343904
chr5 159583044 159583065 IRF1 JASPAR yes 67343905
chr5 159583045 159583060 FOXP1 JASPAR yes 67343906
chr5 159583045 159583066 IRF1 JASPAR yes 67343907
chr5 159583046 159583061 FOXP1 JASPAR yes 67343908
chr5 159583048 159583063 FOXP1 JASPAR yes 67343909
chr5 159583049 159583064 STAT2 JASPAR yes 67343910
chr5 159583050 159583065 FOXP1 JASPAR yes 67343911
chr5 159583053 159583064 FOXP2 JASPAR yes 67343912
Genes associated with rs542120667[chr5:159583056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More