EnhancerDB
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  3. rs542167105[chr5:172281292]
Enhancers that have rs542167105[chr5:172281292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542167105[chr5:172281292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172281285 172281296 E2F1 JASPAR yes 67835050
chr5 172281286 172281297 E2F4 JASPAR yes 67835052
chr5 172281286 172281297 E2F6 JASPAR yes 67835053
chr5 172281287 172281292 SP1 TRANSFAC yes 67835054
Genes associated with rs542167105[chr5:172281292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More