EnhancerDB
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  3. rs542175764[chr17:880015]
Enhancers that have rs542175764[chr17:880015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs542175764[chr17:880015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 879998 880019 IRF1 JASPAR yes 52648288
chr17 880001 880015 SPI1 JASPAR yes 52648289
chr17 880002 880023 IRF1 JASPAR yes 52648290
chr17 880006 880021 FOXP1 JASPAR yes 52648292
chr17 880007 880022 FOXP1 JASPAR yes 52648293
chr17 880008 880023 FOXP1 JASPAR yes 52648294
chr17 880009 880024 FOXP1 JASPAR yes 52648295
chr17 880010 880025 FOXP1 JASPAR yes 52648296
chr17 880011 880026 FOXP1 JASPAR yes 52648297
Genes associated with rs542175764[chr17:880015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More