EnhancerDB
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  3. rs542176599[chr16:89527451]
Enhancers that have rs542176599[chr16:89527451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542176599[chr16:89527451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89527448 89527458 SP1 JASPAR yes 12347579
chr16 89527449 89527459 ZNF740 JASPAR yes 12347580
chr16 89527451 89527461 SP1 JASPAR yes 12347581
chr16 89527451 89527461 ZNF740 JASPAR yes 12347582
Genes associated with rs542176599[chr16:89527451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More