EnhancerDB
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  3. rs542198076[chr1:168440863]
Enhancers that have rs542198076[chr1:168440863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542198076[chr1:168440863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168440359 168440889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844737
chr1 168440853 168440868 FOXA1 JASPAR yes 32928475
chr1 168440854 168440865 FOXB1 JASPAR yes 32928476
chr1 168440854 168440865 FOXC1 JASPAR yes 32928477
chr1 168440854 168440866 FOXC2 JASPAR yes 32928478
chr1 168440854 168440866 MEF2A JASPAR yes 32928479
chr1 168440855 168440867 FOXI1 JASPAR yes 32928480
chr1 168440862 168440877 MEF2C JASPAR yes 32928484
chr1 168440863 168440878 MEF2A JASPAR yes 32928485
Genes associated with rs542198076[chr1:168440863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More