EnhancerDB
  1. Home
  2. SNP
  3. rs542201420[chr2:238585768]
Enhancers that have rs542201420[chr2:238585768]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238585463 238585872 vista35424
VISTA
Transcript factors that have rs542201420[chr2:238585768]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238585755 238585769 MTF1 JASPAR yes 22242436
chr2 238585755 238585769 MTF1 JASPAR yes 82131065
chr2 238585768 238585788 RREB1 JASPAR yes 22242437
chr2 238585768 238585788 RREB1 JASPAR yes 82131066
Genes associated with rs542201420[chr2:238585768], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More