EnhancerDB
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  3. rs542207230[chr17:57871576]
Enhancers that have rs542207230[chr17:57871576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57857985 57884695 enh4506
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542207230[chr17:57871576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57871574 57871595 IRF1 JASPAR yes 55083274
chr17 57871576 57871597 IRF1 JASPAR yes 55083275
Genes associated with rs542207230[chr17:57871576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More