EnhancerDB
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  3. rs542216291[chr1:168455957]
Enhancers that have rs542216291[chr1:168455957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542216291[chr1:168455957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168455707 168456195 ZBTB33 GTRD no Brain (SK-N-SH) 21348379
chr1 168455760 168456313 ZBTB33 GTRD no Brain (SK-N-SH) 21348380
chr1 168455949 168455961 TAL1 JASPAR yes 32931102
chr1 168455951 168455961 NEUROG2 JASPAR yes 32931103
Genes associated with rs542216291[chr1:168455957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More