EnhancerDB
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  3. rs542217922[chr6:15898501]
Enhancers that have rs542217922[chr6:15898501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15886429 15917995 enh8970
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs542217922[chr6:15898501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15898497 15898509 POU3F1 JASPAR yes 100251629
chr6 15898497 15898510 POU3F3 JASPAR yes 100251630
chr6 15898500 15898503 MYB TRANSFAC yes 100251631
chr6 15898500 15898511 CDX2 JASPAR yes 100251632
chr6 15898500 15898511 RUNX1 JASPAR yes 100251633
chr6 15898501 15898512 HOXA10 JASPAR yes 100251634
Genes associated with rs542217922[chr6:15898501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More