EnhancerDB
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  3. rs542218575[chr6:44051049]
Enhancers that have rs542218575[chr6:44051049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542218575[chr6:44051049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44051044 44051059 TFAP2C JASPAR yes 101822239
chr6 44051047 44051058 TFAP2A JASPAR yes 101822240
chr6 44051047 44051058 TFAP2B JASPAR yes 101822241
chr6 44051047 44051058 TFAP2C JASPAR yes 101822242
Genes associated with rs542218575[chr6:44051049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More