EnhancerDB
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  3. rs542221013[chr17:57883922]
Enhancers that have rs542221013[chr17:57883922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57857985 57884695 enh4506
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542221013[chr17:57883922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57883133 57884324 ZNF143 GTRD no Epithelial (MCF-7) 21775978
chr17 57883133 57884324 ZNF143 GTRD no Epithelial (MCF-7) 108277645
chr17 57883750 57884305 ZNF143 GTRD no Epithelial (MCF-7) 21775979
chr17 57883750 57884305 ZNF143 GTRD no Epithelial (MCF-7) 108277646
chr17 57883908 57883923 MEF2C JASPAR yes 55085519
chr17 57883909 57883923 POU4F1 JASPAR yes 55085520
chr17 57883909 57883924 MEF2A JASPAR yes 55085521
chr17 57883910 57883922 MEF2D JASPAR yes 55085522
chr17 57883922 57883941 PAX5 JASPAR yes 55085523
Genes associated with rs542221013[chr17:57883922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More