EnhancerDB
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  3. rs542223386[chr11:12461880]
Enhancers that have rs542223386[chr11:12461880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs542223386[chr11:12461880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12461868 12461882 TCF7L2 JASPAR yes 37446893
chr11 12461868 12461883 LEF1 JASPAR yes 37446894
Genes associated with rs542223386[chr11:12461880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More