EnhancerDB
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  3. rs542228549[chr15:64540792]
Enhancers that have rs542228549[chr15:64540792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 64536784 64542755 enh31454
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542228549[chr15:64540792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 64540785 64540796 CDX2 JASPAR yes 24027914
chr15 64540786 64540797 HOXA10 JASPAR yes 24027915
chr15 64540787 64540796 CDX1 JASPAR yes 24027916
chr15 64540787 64540797 HOXA13 JASPAR yes 24027917
chr15 64540787 64540797 HOXB13 JASPAR yes 24027918
chr15 64540787 64540797 HOXD13 JASPAR yes 24027919
chr15 64540791 64540797 TBP TRANSFAC yes 24027920
Genes associated with rs542228549[chr15:64540792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More