EnhancerDB
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  3. rs542241632[chr12:125229935]
Enhancers that have rs542241632[chr12:125229935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542241632[chr12:125229935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125229736 125230136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21582632
chr12 125229933 125229947 GLIS2 JASPAR yes 124416789
chr12 125229933 125229947 GLIS3 JASPAR yes 124416790
chr12 125229934 125229944 ZNF740 JASPAR yes 124416791
chr12 125229935 125229945 ZNF740 JASPAR yes 124416792
Genes associated with rs542241632[chr12:125229935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More