EnhancerDB
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  3. rs542252383[chr1:39859506]
Enhancers that have rs542252383[chr1:39859506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542252383[chr1:39859506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39859485 39859506 ZNF263 JASPAR yes 28272794
chr1 39859489 39859510 ZNF263 JASPAR yes 28272795
chr1 39859492 39859513 ZNF263 JASPAR yes 28272796
chr1 39859493 39859514 ZNF263 JASPAR yes 28272797
chr1 39859494 39859515 ZNF263 JASPAR yes 28272798
chr1 39859500 39859521 ZNF263 JASPAR yes 28272799
chr1 39859502 39859523 ZNF263 JASPAR yes 28272800
chr1 39859503 39859524 ZNF263 JASPAR yes 28272801
chr1 39859504 39859515 E2F6 JASPAR yes 28272802
chr1 39859505 39859526 ZNF263 JASPAR yes 28272803
chr1 39859506 39859514 SP1 TRANSFAC yes 28272804
chr1 39859506 39859527 ZNF263 JASPAR yes 28272805
Genes associated with rs542252383[chr1:39859506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More