EnhancerDB
  1. Home
  2. SNP
  3. rs542276979[chr11:2552493]
Enhancers that have rs542276979[chr11:2552493]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 2550705 2561395 enh13698
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr11 2552386 2556805 vista250
VISTA
Transcript factors that have rs542276979[chr11:2552493]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 2552490 2552501 TFAP2C JASPAR yes 37012333
chr11 2552490 2552501 TFAP2C JASPAR yes 111901760
chr11 2552491 2552500 TFAP2A JASPAR yes 37012334
chr11 2552491 2552500 TFAP2A JASPAR yes 111901761
Genes associated with rs542276979[chr11:2552493], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More