EnhancerDB
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  3. rs542289739[chr15:55512446]
Enhancers that have rs542289739[chr15:55512446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542289739[chr15:55512446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55512430 55512450 RREB1 JASPAR yes 23494007
chr15 55512431 55512451 RREB1 JASPAR yes 23494008
chr15 55512434 55512454 RREB1 JASPAR yes 23494009
chr15 55512435 55512455 RREB1 JASPAR yes 23494010
chr15 55512438 55512450 FOXI1 JASPAR yes 23494012
chr15 55512438 55512453 FOXP1 JASPAR yes 23494013
chr15 55512438 55512458 RREB1 JASPAR yes 23494014
chr15 55512439 55512459 RREB1 JASPAR yes 23494015
chr15 55512442 55512454 FOXI1 JASPAR yes 23494016
chr15 55512443 55512463 RREB1 JASPAR yes 23494017
chr15 55512445 55512460 FOXA1 JASPAR yes 23494018
chr15 55512446 55512458 FOXI1 JASPAR yes 23494019
chr15 55512446 55512461 FOXP1 JASPAR yes 23494020
Genes associated with rs542289739[chr15:55512446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More