EnhancerDB
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  3. rs542292456[chr1:235166574]
Enhancers that have rs542292456[chr1:235166574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs542292456[chr1:235166574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235166159 235166599 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403488
chr1 235166200 235166618 ZNF143 GTRD no Epithelial (MCF-7) 21403489
chr1 235166303 235166583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403491
chr1 235166404 235166864 ZNF274 GTRD no Bone Marrow (K562) 21403492
chr1 235166449 235166899 ZNF274 GTRD no Bone Marrow (K562) 21403493
chr1 235166450 235166786 ZNF143 GTRD no Epithelial (MCF-7) 21403494
chr1 235166490 235166805 ZNF274 GTRD no Liver (HepG2) 21403495
chr1 235166557 235166889 ZNF274 GTRD no Cervix (HeLa-S3) 21403496
chr1 235166563 235166574 NFKB1 JASPAR yes 36344986
chr1 235166564 235166574 REL JASPAR yes 36344987
chr1 235166573 235166577 NFE TRANSFAC yes 36344988
Genes associated with rs542292456[chr1:235166574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More