EnhancerDB
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Enhancers that have rs542369456[chr18:55891674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs542369456[chr18:55891674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55891089 55891745 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338172
chr18 55891138 55891714 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338173
chr18 55891148 55891688 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338174
chr18 55891162 55891766 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824053
chr18 55891162 55891766 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338175
chr18 55891175 55891715 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338177
chr18 55891216 55891720 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824058
chr18 55891216 55891720 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338183
chr18 55891218 55891702 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338184
chr18 55891261 55891860 FOS UCSC Txn Factor no Conserved 108338196
chr18 55891265 55891709 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21824068
chr18 55891265 55891709 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108338197
chr18 55891303 55891699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824073
chr18 55891303 55891699 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338205
chr18 55891417 55891893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824085
chr18 55891417 55891893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338223
chr18 55891666 55891674 FEV JASPAR yes 110929115
chr18 55891667 55891674 SPI1 JASPAR yes 110929116
Genes associated with rs542369456[chr18:55891674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More