EnhancerDB
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  3. rs542419123[chr1:200747580]
Enhancers that have rs542419123[chr1:200747580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200738186 200752375 enh872
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Stomach Placenta Colon (HCT116) Uterus Adrenal Blood (Karpas-422) Lung (PC-9) Kidney Neural Stem Cells (H9) Heart
Transcript factors that have rs542419123[chr1:200747580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200747579 200747594 FOXP1 JASPAR yes 34471067
chr1 200747580 200747589 SRY JASPAR yes 34471068
chr1 200747580 200747591 FOXP2 JASPAR yes 34471069
Genes associated with rs542419123[chr1:200747580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More