EnhancerDB
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  3. rs542441194[chr17:43378733]
Enhancers that have rs542441194[chr17:43378733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs542441194[chr17:43378733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43378661 43379289 TCF7L2 GTRD no Colon (HCT116) 21764234
chr17 43378661 43379470 TCF7L2 GTRD no Colon (HCT116) 21764235
Genes associated with rs542441194[chr17:43378733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More