EnhancerDB
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  3. rs542454526[chr1:234660113]
Enhancers that have rs542454526[chr1:234660113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542454526[chr1:234660113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 21393809
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880091
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880092
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880094
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880095
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880098
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880099
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880102
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880103
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 21393830
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880109
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880110
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880117
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880118
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 21393916
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880131
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880132
chr1 234659110 234660154 ZNF274 GTRD no Cervix (HeLa-S3) 21393958
chr1 234659110 234660154 ZNF274 GTRD no Cervix (HeLa-S3) 107880191
chr1 234659171 234660113 ZBTB33 GTRD no Lung (A549) 107880194
chr1 234659192 234660185 ZNF274 GTRD no Cervix (HeLa-S3) 21393959
chr1 234659192 234660185 ZNF274 GTRD no Cervix (HeLa-S3) 107880196
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 21393963
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 107880201
chr1 234659311 234660839 ZBTB33 GTRD no Lung (A549) 107880231
chr1 234659333 234660449 ZBTB33 GTRD no Lung (A549) 107880249
chr1 234659378 234660286 ZBTB33 GTRD no Lung (A549) 107880286
chr1 234659384 234660118 ZBTB33 GTRD no Lung (A549) 107880290
chr1 234659423 234660332 ZBTB33 GTRD no Brain (SK-N-SH) 21394032
chr1 234659423 234660332 ZBTB33 GTRD no Brain (SK-N-SH) 107880305
chr1 234659470 234660263 ZBTB33 GTRD no Brain (SK-N-SH) 21394046
chr1 234659470 234660263 ZBTB33 GTRD no Brain (SK-N-SH) 107880321
chr1 234659648 234660280 ZNF274 GTRD no Blood (GM12878) 107880335
chr1 234660102 234660117 MEF2C JASPAR yes 36283408
chr1 234660109 234660123 FOXF2 JASPAR yes 36283410
chr1 234660110 234660124 POU4F1 JASPAR yes 36283411
chr1 234660110 234660126 POU4F2 JASPAR yes 36283412
chr1 234660110 234660126 POU4F3 JASPAR yes 36283413
chr1 234660111 234660122 FOXC1 JASPAR yes 36283414
chr1 234660111 234660123 FOXC2 JASPAR yes 36283415
Genes associated with rs542454526[chr1:234660113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More