EnhancerDB
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  3. rs542474538[chr17:41486439]
Enhancers that have rs542474538[chr17:41486439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542474538[chr17:41486439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41486428 41486444 SRF JASPAR yes 54343261
chr17 41486435 41486449 E2F7 JASPAR yes 54343263
chr17 41486436 41486448 E2F8 JASPAR yes 54343264
Genes associated with rs542474538[chr17:41486439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More