EnhancerDB
  1. Home
  2. SNP
  3. rs542497021[chr1:39613187]
Enhancers that have rs542497021[chr1:39613187]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542497021[chr1:39613187]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39613166 39613187 ZNF263 JASPAR yes 28258476
chr1 39613167 39613188 ZNF263 JASPAR yes 28258477
chr1 39613169 39613190 IRF1 JASPAR yes 28258478
chr1 39613170 39613191 ZNF263 JASPAR yes 28258479
chr1 39613173 39613194 ZNF263 JASPAR yes 28258482
chr1 39613174 39613189 FOXP1 JASPAR yes 28258483
chr1 39613174 39613195 ZNF263 JASPAR yes 28258484
chr1 39613177 39613198 ZNF263 JASPAR yes 28258485
chr1 39613180 39613201 ZNF263 JASPAR yes 28258486
chr1 39613182 39613203 IRF1 JASPAR yes 28258487
chr1 39613183 39613204 ZNF263 JASPAR yes 28258488
chr1 39613184 39613199 PRDM1 JASPAR yes 28258489
chr1 39613184 39613205 ZNF263 JASPAR yes 28258490
chr1 39613187 39613202 FOXP1 JASPAR yes 28258491
chr1 39613187 39613208 ZNF263 JASPAR yes 28258492
Genes associated with rs542497021[chr1:39613187], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More