EnhancerDB
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  3. rs542498800[chr2:238583637]
Enhancers that have rs542498800[chr2:238583637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238583352 238583931 vista35423
VISTA
Transcript factors that have rs542498800[chr2:238583637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238583219 238583819 MYC UCSC Txn Factor no Conserved 108435942
chr2 238583291 238583949 RUNX3 UCSC Txn Factor no Conserved 108435943
chr2 238583347 238583858 MAX UCSC Txn Factor no Conserved 108435944
chr2 238583371 238583701 BHLHE40 UCSC Txn Factor no Conserved 108435945
chr2 238583427 238583869 MXI1 UCSC Txn Factor no Conserved 108435946
chr2 238583494 238583798 ELF1 UCSC Txn Factor no Conserved 108435947
chr2 238583632 238583641 TFAP2A JASPAR yes 22242328
chr2 238583632 238583641 TFAP2A JASPAR yes 82130713
Genes associated with rs542498800[chr2:238583637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More