EnhancerDB
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  3. rs542501944[chr17:788737]
Enhancers that have rs542501944[chr17:788737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs542501944[chr17:788737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 788719 788740 IRF1 JASPAR yes 52636917
chr17 788720 788741 IRF1 JASPAR yes 52636919
chr17 788724 788739 PRDM1 JASPAR yes 52636920
chr17 788725 788746 IRF1 JASPAR yes 52636921
chr17 788726 788747 IRF1 JASPAR yes 52636922
chr17 788728 788742 IRF7 JASPAR yes 52636923
chr17 788729 788743 STAT1 JASPAR yes 52636924
chr17 788731 788746 FOXP1 JASPAR yes 52636925
chr17 788731 788752 IRF1 JASPAR yes 52636926
chr17 788732 788747 FOXP1 JASPAR yes 52636927
chr17 788732 788753 IRF1 JASPAR yes 52636928
chr17 788733 788738 ETS2 TRANSFAC yes 52636929
Genes associated with rs542501944[chr17:788737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More