EnhancerDB
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  3. rs542508648[chr16:89511251]
Enhancers that have rs542508648[chr16:89511251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542508648[chr16:89511251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89511242 89511257 JUND JASPAR yes 12345140
chr16 89511243 89511256 JUN JASPAR yes 12345141
chr16 89511244 89511257 ATF4 JASPAR yes 12345142
chr16 89511244 89511258 ATF7 JASPAR yes 12345143
chr16 89511245 89511257 DBP JASPAR yes 12345144
chr16 89511245 89511257 HLF JASPAR yes 12345145
chr16 89511245 89511257 JDP2 JASPAR yes 12345146
chr16 89511245 89511257 TEF JASPAR yes 12345147
chr16 89511247 89511258 NFIL3 JASPAR yes 12345148
chr16 89511248 89511259 DMRT3 JASPAR yes 12345149
Genes associated with rs542508648[chr16:89511251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More