EnhancerDB
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  3. rs542553263[chr3:149299228]
Enhancers that have rs542553263[chr3:149299228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542553263[chr3:149299228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149299219 149299234 RUNX2 JASPAR yes 6508875
chr3 149299220 149299229 RUNX2 JASPAR yes 6508876
chr3 149299220 149299230 RUNX3 JASPAR yes 6508877
chr3 149299220 149299231 RUNX1 JASPAR yes 6508878
chr3 149299225 149299231 SOX10 JASPAR yes 6508879
Genes associated with rs542553263[chr3:149299228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More