EnhancerDB
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  3. rs542557202[chr6:42295747]
Enhancers that have rs542557202[chr6:42295747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs542557202[chr6:42295747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42295726 42295747 IRF1 JASPAR yes 101709501
chr6 42295728 42295749 IRF1 JASPAR yes 101709502
chr6 42295732 42295753 IRF1 JASPAR yes 101709503
chr6 42295734 42295749 PRDM1 JASPAR yes 101709504
chr6 42295734 42295749 STAT2 JASPAR yes 101709505
chr6 42295735 42295749 SPIC JASPAR yes 101709506
chr6 42295735 42295749 STAT1 JASPAR yes 101709507
chr6 42295736 42295757 IRF1 JASPAR yes 101709508
chr6 42295737 42295752 FOXP1 JASPAR yes 101709509
chr6 42295737 42295758 IRF1 JASPAR yes 101709510
chr6 42295738 42295759 IRF1 JASPAR yes 101709511
chr6 42295739 42295754 FOXP1 JASPAR yes 101709512
chr6 42295739 42295760 IRF1 JASPAR yes 101709513
chr6 42295740 42295761 IRF1 JASPAR yes 101709514
chr6 42295741 42295756 FOXP1 JASPAR yes 101709515
chr6 42295741 42295762 IRF1 JASPAR yes 101709516
chr6 42295742 42295757 FOXP1 JASPAR yes 101709517
chr6 42295743 42295758 FOXP1 JASPAR yes 101709518
chr6 42295744 42295759 FOXP1 JASPAR yes 101709519
chr6 42295745 42295760 FOXP1 JASPAR yes 101709520
chr6 42295746 42295761 FOXP1 JASPAR yes 101709521
chr6 42295747 42295762 FOXP1 JASPAR yes 101709522
Genes associated with rs542557202[chr6:42295747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More