EnhancerDB
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  3. rs542581305[chr6:36624883]
Enhancers that have rs542581305[chr6:36624883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542581305[chr6:36624883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36624880 36624895 FOXP1 JASPAR yes 101355263
chr6 36624881 36624896 FOXP1 JASPAR yes 101355264
chr6 36624882 36624897 FOXP1 JASPAR yes 101355265
chr6 36624882 36624903 IRF1 JASPAR yes 101355266
chr6 36624883 36624898 FOXP1 JASPAR yes 101355267
Genes associated with rs542581305[chr6:36624883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More